PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu020086.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 364aa MW: 41095.6 Da PI: 5.7227

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu020086.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.7	1.3e-13	17	62	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ + Rt+k+c++rw + Oeu020086.1 17 KGPWKAEEDEVLINHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 62 79***********************8887799********87 PP
2	Myb_DNA-binding	45.4	1.9e-14	73	112	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++eE+ +d+ +q+G++ W++Ia +++ gRt++++k++w Oeu020086.1 73 KFSAEEERTVIDLQAQFGNK-WAKIATYLP-GRTDNDVKNFW 112 79****************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDGRKRMLCD DMGTIKKGPW KAEEDEVLIN HVNKYGPRDW SSIRSKGLLQ RTGKSCRLRW 60 VNKLRPNLKN GVKFSAEEER TVIDLQAQFG NKWAKIATYL PGRTDNDVKN FWSSRQKRLA 120 RILQTSAPPC GSKPRKNKEI QVPPLLDGVP SLEVCRTSYF SLFTPQTLVK ECSFRVLFLC 180 EQGSSLHDLP SVEAPIFSML REEESIIKSR SCSSPYIDDS ETIKMVPLQG LMYPGSLNFE 240 HSPHQIEFNP AVDKQSYEEQ QLQLPFPQIL QLQPDYSLPV ENQDFITRLG DPNFYDVFGQ 300 CSGSELGTGQ LPILPSCFGP DGGSHTPSQG ENQNIVTPDS FIDDFPPMDI FDHLDPLPSP 360 SQW*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDGRKRMLCD DMGTIKKGPW KAEEDEVLIN HVNKYGPRDW SSIRSKGLLQ RTGKSCRLRW  60
VNKLRPNLKN GVKFSAEEER TVIDLQAQFG NKWAKIATYL PGRTDNDVKN FWSSRQKRLA  120
RILQTSAPPC GSKPRKNKEI QVPPLLDGVP SLEVCRTSYF SLFTPQTLVK ECSFRVLFLC  180
EQGSSLHDLP SVEAPIFSML REEESIIKSR SCSSPYIDDS ETIKMVPLQG LMYPGSLNFE  240
HSPHQIEFNP AVDKQSYEEQ QLQLPFPQIL QLQPDYSLPV ENQDFITRLG DPNFYDVFGQ  300
CSGSELGTGQ LPILPSCFGP DGGSHTPSQG ENQNIVTPDS FIDDFPPMDI FDHLDPLPSP  360
SQW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	5e-70	MYB family protein