PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu018565.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 539aa MW: 57531.1 Da PI: 7.4101

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu018565.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.1	2e-08	229	257	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 r++W++eEd +l+ av++ G ++W+ + + Oeu018565.2 229 RKPWSAEEDMQLIAAVQKCGERNWANVLK 257 789*******************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MADTTKMRKK GSISENDVST LLQRYSAQTV LALLQEVAVV SERKIDWNAM VKNTSTGIYN 60 PREYQKLWRH LAYGDDLVDS LNDAANPLCT RGCTQLDQLP VSSVSQASTS ERDDDSDLEF 120 ELEAFPAVSR ETSVEAAAFV KVLIASGTLN DSHLSTNSTI EAPLTINIPN REKSTAPSEG 180 SHLASCMQWT NITIPVSVQK QQLATSVTCS EKRRTNVSTS SNLPTRRKRK PWSAEEDMQL 240 IAAVQKCGER NWANVLKGDF KGDRKPSELS QRWATIRKKQ GNLNAGASSQ LSEIHAARRA 300 ISLALDMPLG DHLKAASNTG GTSSNSKAGN SNHPVFVETS SIGVPSLKRP STNPTQTQGS 360 MAAVAAGACI VKTPVASSEI EAPLSQNAVC TIAGGGSIIK SLTTGLSNQL PSNVRFIRNG 420 LAKAPITNCS LTMKNASTPA EARQAQVPNA GTARTVAEAT LSSSENVTQE NVQNNEAAVS 480 RDASREEIRE SQVALVGNRS EEEVENQASF LGNASEENTR ANGAPILSRT PVGPTKDD*

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MADTTKMRKK GSISENDVST LLQRYSAQTV LALLQEVAVV SERKIDWNAM VKNTSTGIYN  60
PREYQKLWRH LAYGDDLVDS LNDAANPLCT RGCTQLDQLP VSSVSQASTS ERDDDSDLEF  120
ELEAFPAVSR ETSVEAAAFV KVLIASGTLN DSHLSTNSTI EAPLTINIPN REKSTAPSEG  180
SHLASCMQWT NITIPVSVQK QQLATSVTCS EKRRTNVSTS SNLPTRRKRK PWSAEEDMQL  240
IAAVQKCGER NWANVLKGDF KGDRKPSELS QRWATIRKKQ GNLNAGASSQ LSEIHAARRA  300
ISLALDMPLG DHLKAASNTG GTSSNSKAGN SNHPVFVETS SIGVPSLKRP STNPTQTQGS  360
MAAVAAGACI VKTPVASSEI EAPLSQNAVC TIAGGGSIIK SLTTGLSNQL PSNVRFIRNG  420
LAKAPITNCS LTMKNASTPA EARQAQVPNA GTARTVAEAT LSSSENVTQE NVQNNEAAVS  480
RDASREEIRE SQVALVGNRS EEEVENQASF LGNASEENTR ANGAPILSRT PVGPTKDD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	212	230	KRRTNVSTSSNLPTRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.2	5e-77	MYB_related family protein