PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu017399.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 660aa MW: 73034.7 Da PI: 9.0524

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu017399.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.4e-08	564	613	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r ++T E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Oeu017399.2 564 RRPFTVSEVEALVQAVEKLGTGRWRDVKLKAFdnvKHRTYVDLKDKWKTL 613 679*********************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MKLQKRLDYG FSGYEVPRIP RAARSSRRRC IFPSKTDDHQ LGSFDLLATV ADELLMEGGI 60 SPNPVDTFSG EEHQAVVEDS ITEERAKDKP FIVKPCDLDI CDQSSLLTEQ VLEAPVSNFG 120 SNELTSLPND VCLLPASVIT SECLQKVGSA GQFADDECKL GLRIITQKLD VQSSGCRVST 180 GCRLEGESEK QIKMESKIFR NLSISSRDGM GHMSCCSFPF NSEGVKIVTR DNDENSSRRT 240 QPRNANKAIR SLARSGDRRI RKSLVSKYWK TTTNLQGEGY NSNKKRCSFP NTKNRYKRQI 300 SQRDYPFKKR KLYYCSSAPN TDVIVSSDGI CSLPEHDSKA AACSYGSALP GVNAAPTSAT 360 GECSPSQSNS HVKLKIKSFR VPELFIEIPE TATVGSLKRT VMKAVTAILG DGLRVGMLLQ 420 GKKIRDDNRT LLQTGISHDN KSDALGFTLE PNHTQASPTV CPEDPFQLPR DNPQPLARIS 480 PISNAVQDAV KQGNLDALPD LMGSNIRNFP ESDNDSAPST PDMSLEKTPT GSRALVAVPE 540 MREPLAIVST HKSKRSESLQ RRMRRPFTVS EVEALVQAVE KLGTGRWRDV KLKAFDNVKH 600 RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLTA HAYWSEQQTK YQLGSQAAT*

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MKLQKRLDYG FSGYEVPRIP RAARSSRRRC IFPSKTDDHQ LGSFDLLATV ADELLMEGGI  60
SPNPVDTFSG EEHQAVVEDS ITEERAKDKP FIVKPCDLDI CDQSSLLTEQ VLEAPVSNFG  120
SNELTSLPND VCLLPASVIT SECLQKVGSA GQFADDECKL GLRIITQKLD VQSSGCRVST  180
GCRLEGESEK QIKMESKIFR NLSISSRDGM GHMSCCSFPF NSEGVKIVTR DNDENSSRRT  240
QPRNANKAIR SLARSGDRRI RKSLVSKYWK TTTNLQGEGY NSNKKRCSFP NTKNRYKRQI  300
SQRDYPFKKR KLYYCSSAPN TDVIVSSDGI CSLPEHDSKA AACSYGSALP GVNAAPTSAT  360
GECSPSQSNS HVKLKIKSFR VPELFIEIPE TATVGSLKRT VMKAVTAILG DGLRVGMLLQ  420
GKKIRDDNRT LLQTGISHDN KSDALGFTLE PNHTQASPTV CPEDPFQLPR DNPQPLARIS  480
PISNAVQDAV KQGNLDALPD LMGSNIRNFP ESDNDSAPST PDMSLEKTPT GSRALVAVPE  540
MREPLAIVST HKSKRSESLQ RRMRRPFTVS EVEALVQAVE KLGTGRWRDV KLKAFDNVKH  600
RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLTA HAYWSEQQTK YQLGSQAAT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	302	311	QRDYPFKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-127	MYB_related family protein