PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016742.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 488aa MW: 51755.4 Da PI: 8.4189

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016742.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.4e-05	22	44	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu016742.1 22 FVCEICNKGFQRDQNLQLHRRGH 44 89*******************88 PP
2	zf-C2H2	17.4	1.2e-05	98	120	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k + +s+ k H++t+ Oeu016742.1 98 YKCERCTKKYAVQSDWKAHMKTC 120 9********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MPDPDAEVIA LSPRTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQRTSKEVRK 60 RVYICPEPTC VHHDHSRALG DLTGIKKHFC RKHGEKNYKC ERCTKKYAVQ SDWKAHMKTC 120 GTKEYRCDCG TLFSRKDSFI THRAFCDALA QESARSLPTV ITISEGDLKV ENVPAAAVKL 180 LEPSPPLPPL TPSTGVLSPV LSIQSPELPE NKTMQPGSAA LSTLVTNTKT TAATTAAFGS 240 GGSGSLGNAA TTNGLFAGIL TGSTSSELSQ SSIQPTPYSD LLCAMSGSKR TGNPIDPMSL 300 SLSPALYPSN GASALFSSTS QDHQRYYASN SQPALSATAL LQKAAQIGAT SSKSSLLGLA 360 MSSSYDLLDN ASTMASSTTG RPMLWNHQVK LEHNLLASGL GLGLPSSSTP GSNDLMLGQS 420 TLFDNNPTTL DFLGLGMGGS EVVPSGYSAF LTSIGGGLDM STSSFGGVNT ARETWDDSSD 480 GKPSLLR*

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MPDPDAEVIA LSPRTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQRTSKEVRK  60
RVYICPEPTC VHHDHSRALG DLTGIKKHFC RKHGEKNYKC ERCTKKYAVQ SDWKAHMKTC  120
GTKEYRCDCG TLFSRKDSFI THRAFCDALA QESARSLPTV ITISEGDLKV ENVPAAAVKL  180
LEPSPPLPPL TPSTGVLSPV LSIQSPELPE NKTMQPGSAA LSTLVTNTKT TAATTAAFGS  240
GGSGSLGNAA TTNGLFAGIL TGSTSSELSQ SSIQPTPYSD LLCAMSGSKR TGNPIDPMSL  300
SLSPALYPSN GASALFSSTS QDHQRYYASN SQPALSATAL LQKAAQIGAT SSKSSLLGLA  360
MSSSYDLLDN ASTMASSTTG RPMLWNHQVK LEHNLLASGL GLGLPSSSTP GSNDLMLGQS  420
TLFDNNPTTL DFLGLGMGGS EVVPSGYSAF LTSIGGGLDM STSSFGGVNT ARETWDDSSD  480
GKPSLLR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-114	C2H2 family protein