PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu016222.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 554aa MW: 62182.6 Da PI: 8.5597

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu016222.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00056	487	509	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + Cp C+++F++ L H r+H Oeu016222.2 487 HICPFCDRVFKNGQALGGHKRSH 509 68******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MEEDQELRFV CKFCNKRFVC GKSLGGHMRS HVIANSAESE EKVEANMKRI SSLGGPGKII 60 INESRVVEFA NGQSNYGLRE NPKKTWRAVG STFPLPQEKV CKQCGKGFQS LKALCGHMAC 120 HSERERGLKD DHSWTSENQK LVMDSHSDTE SEDRMLRTRI SKSKRFKKII VKSSSFSFAN 180 NGSSTVSEID EQEQEEIAMC LMMLSRDSGS KGGVNSVVEY SDNNSVILET KSSSIDMRIG 240 RKEGLNYVNN QDEAFQKKKI GDRKLEGRTL DADIAQMEKS DSGYFLDECA KVESDGSVDG 300 YHRNGSFGEW KKFQTGVGAI GEESVSEFKK SLNRIKSYKT ELGKEVAREN GYDDAGRVSN 360 SARIESRKRK HRFEVSECWN ESGSKMKNGS SDDQVFDNAQ KRSKYQCLNC KKTFNSYQAL 420 GGHRPCHKKS NAIFESRYEM GENSLDGAND FRTAYKLGES TSKKKLIPKI SSHDSKKGVK 480 SKKNKVHICP FCDRVFKNGQ ALGGHKRSHF IGGHEETSSR TPLVKPELPD LLDLNLPAPE 540 EDEDDDHGQF FSW*

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MEEDQELRFV CKFCNKRFVC GKSLGGHMRS HVIANSAESE EKVEANMKRI SSLGGPGKII  60
INESRVVEFA NGQSNYGLRE NPKKTWRAVG STFPLPQEKV CKQCGKGFQS LKALCGHMAC  120
HSERERGLKD DHSWTSENQK LVMDSHSDTE SEDRMLRTRI SKSKRFKKII VKSSSFSFAN  180
NGSSTVSEID EQEQEEIAMC LMMLSRDSGS KGGVNSVVEY SDNNSVILET KSSSIDMRIG  240
RKEGLNYVNN QDEAFQKKKI GDRKLEGRTL DADIAQMEKS DSGYFLDECA KVESDGSVDG  300
YHRNGSFGEW KKFQTGVGAI GEESVSEFKK SLNRIKSYKT ELGKEVAREN GYDDAGRVSN  360
SARIESRKRK HRFEVSECWN ESGSKMKNGS SDDQVFDNAQ KRSKYQCLNC KKTFNSYQAL  420
GGHRPCHKKS NAIFESRYEM GENSLDGAND FRTAYKLGES TSKKKLIPKI SSHDSKKGVK  480
SKKNKVHICP FCDRVFKNGQ ALGGHKRSHF IGGHEETSSR TPLVKPELPD LLDLNLPAPE  540
EDEDDDHGQF FSW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	4e-59	C2H2 family protein