PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu015920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | Nin-like | ||||||||
Protein Properties | Length: 251aa MW: 29095.8 Da PI: 11.3711 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.3 | 1.1e-26 | 18 | 67 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 k +s e++s+yF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk+ sl Oeu015920.1 18 KILSKETISQYFYMPITKAARELNVGLTLLKKRCRELGIRRWPHRKLMSL 67 56899******************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MKRVKRHREV KTHTSNFKIL SKETISQYFY MPITKAAREL NVGLTLLKKR CRELGIRRWP 60 HRKLMSLQTL IKNVQVLQEL GQEKGEGKLR DAIQILEQER KLMEEVPDLK LADKTKRLRQ 120 ACFKVNYKKR KLMAGMPSMI SKSKSRGSSG DNPTAIGGGQ RGPTFRDLRT SVRERSSPAM 180 VDFVTERTDF QRFRDFISSS FPSRHFWSPP VVALVTTASD FYRFTDFDFS SFRSRHMGFA 240 GGRLLRERKD * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18790.1 | 8e-55 | Nin-like family protein |