PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014920.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 515aa MW: 53560.4 Da PI: 7.9203

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014920.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.5e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H Oeu014920.1 63 FVCEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	11.2	0.0012	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + Oeu014920.1 139 WKCDKCSKKYAVQSDWKAHSKIC 161 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MPADLDNCST VNDYTASGDS SSGNQIAPPK PNVKKKRNLP GMPDPDAEVI ALSPKALLAT 60 NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRSNKEPK KRVYVCPEPS CVHHDPLRAL 120 GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF 180 ITHRAFCDAL AEESAKTHTA MAPPSADEEP QIQAVESSPS LPPSTVAPPP PQPPQAPALA 240 ISSSSGVVSS VLPVQNPELV ESSNPSPSTA QILETSTPTP PVTSLTTSFS SVSSSSSSGS 300 TSSNVFASLF ASSTASGSLQ SQTTNLFEAL ARPEQIVDVA PSSSSEPVSL CLATNQGSSI 360 FGTAGQERRQ YAPALQPAPM SATALLQKAA QMGAAASNAS LLRGVGIVSS SSPSSGLQEW 420 SGQQIKPEGA PLAAGLGLGL TCDGGSSLKE LMLGTPSVFC PKHTTLDLLG LGMAASGSPS 480 GGLSALMTSI NNGLDVAAAA AAFGGGEFGG KDME*

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MPADLDNCST VNDYTASGDS SSGNQIAPPK PNVKKKRNLP GMPDPDAEVI ALSPKALLAT  60
NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LKQRSNKEPK KRVYVCPEPS CVHHDPLRAL  120
GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF  180
ITHRAFCDAL AEESAKTHTA MAPPSADEEP QIQAVESSPS LPPSTVAPPP PQPPQAPALA  240
ISSSSGVVSS VLPVQNPELV ESSNPSPSTA QILETSTPTP PVTSLTTSFS SVSSSSSSGS  300
TSSNVFASLF ASSTASGSLQ SQTTNLFEAL ARPEQIVDVA PSSSSEPVSL CLATNQGSSI  360
FGTAGQERRQ YAPALQPAPM SATALLQKAA QMGAAASNAS LLRGVGIVSS SSPSSGLQEW  420
SGQQIKPEGA PLAAGLGLGL TCDGGSSLKE LMLGTPSVFC PKHTTLDLLG LGMAASGSPS  480
GGLSALMTSI NNGLDVAAAA AAFGGGEFGG KDME*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-129	C2H2 family protein