PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu014499.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 560aa    MW: 62933.2 Da    PI: 5.5047
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu014499.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.75.1e-3149132186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rW++qe+laL+++r++m+ ++r+++lk+plWeevs+km+e g++r+pk+Ckek+en+ k++k++keg++++  ++ +t+++fdql+
  Oeu014499.2  49 RWPRQETLALLKIRSDMDVAFRDSSLKGPLWEEVSRKMAELGYQRNPKKCKEKFENVYKYHKRTKEGRSSK--PDGKTYKFFDQLQ 132
                  8********************************************************************95..77789******98 PP
2trihelix104.48.1e-33365450187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k ev+aLi++r++++ +++++  k+plWee+s++m++ g++r++k+Ckekwen+nk++kk+ke++kkr +e+s+tcpyf+ql+a
  Oeu014499.2 365 RWPKAEVQALIKLRTDLDLKYQDNGPKGPLWEEISAAMAKIGYNRNAKRCKEKWENINKYFKKVKESNKKR-PEDSKTCPYFEQLDA 450
                  8*********************************************************************8.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    
MMLGDSDGGA ASVKGNESGE AGLGSGGFGE EDKLGIEEGD RSGGGGGNRW PRQETLALLK  60
IRSDMDVAFR DSSLKGPLWE EVSRKMAELG YQRNPKKCKE KFENVYKYHK RTKEGRSSKP  120
DGKTYKFFDQ LQALEHNPLP LLAPPPLGTT NPPIAAKISP TSTVPQRINT PTNFSFPPLQ  180
PPTMHTTNPL QTHTLPPSRP NISISTSSST SSDEDIQRRH KRKRKWMEYF EILMKDVIEK  240
QEELHKKFLE TLEKRERDRI AREEAWRAEE MAKLNKEHEL LVQERSIAAA KDSAVIAFLQ  300
KISGQQNLQI PTVQVPHSPS PPVAPPQQPP APPPVPVTAE ATPVRIETPK ADYRSENLPL  360
ASSSRWPKAE VQALIKLRTD LDLKYQDNGP KGPLWEEISA AMAKIGYNRN AKRCKEKWEN  420
INKYFKKVKE SNKKRPEDSK TCPYFEQLDA IYKEKAKNES SSINSGYSLP KPDNPIVPLM  480
AVPEQQWPLP LRAEHQQESA LDDEHENIDQ NDHDNDRDDD DDGDDRDDDE DEDEDEDGGG  540
GYKIVTNKQQ SSVTSTAFE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1217224QRRHKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.21e-111Trihelix family protein