PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014402.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 604aa MW: 69135.3 Da PI: 5.3581

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014402.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	575	593	2	20
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 +C++Cg+ F ++ L++Hi Oeu014402.1 575 VCEKCGEEFESRNKLHKHI 593 6*****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
MASSEKRCLY EVLGLSRDCT PDEIRSAYKK LALQRHPDKL VQSGVPEVEA TAAFQELVNA 60 YEVLSDPRER VWYDSHRSEI LFSSNNSSKS SGPVPDLFSF FSNSVYSGYS DSGRGFYKVY 120 GEIFEKIYAA EFNFAKKLGL PMPKEAPVIG NLESPYAQVT AFYNYWLGFA TSMDFCWVDQ 180 YDVMAGPNRK SRRVMEEENK KLRKKAKREY NETVRGLAEF VRKRDKRVID MQAKRNEEME 240 RKREEERWRK KELERQKVEK ARNFEEPEWT KVKELESEES EDAVEEDAKK KELYCVACGK 300 KFKSDKQWKN HERSKKHKEK VAELREAFGE EDTEFEVTEG NERKNEEKED EGYLSADDGV 360 NDLRNEFEDS VGIHGLESNE ENAESNEEGG IVDIDNGSVS RLFNAELESD DDEASLLEAM 420 VSGHKTRKKV DARHQTKAPE KKIQVEVDVD ETGYMEYNNT KGSRRNKGGK RRKGRTQEEE 480 TIRADVTEAN DVTEDNGEIE EQNGRYDDSH VESTSNPVKE SANEDKGDNA SERDHDLPKQ 540 AVNKRNATKK SDVSKSKVAP KGRKHKAAAK VSGNVCEKCG EEFESRNKLH KHIGETGHAS 600 LKF*

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

MASSEKRCLY EVLGLSRDCT PDEIRSAYKK LALQRHPDKL VQSGVPEVEA TAAFQELVNA  60
YEVLSDPRER VWYDSHRSEI LFSSNNSSKS SGPVPDLFSF FSNSVYSGYS DSGRGFYKVY  120
GEIFEKIYAA EFNFAKKLGL PMPKEAPVIG NLESPYAQVT AFYNYWLGFA TSMDFCWVDQ  180
YDVMAGPNRK SRRVMEEENK KLRKKAKREY NETVRGLAEF VRKRDKRVID MQAKRNEEME  240
RKREEERWRK KELERQKVEK ARNFEEPEWT KVKELESEES EDAVEEDAKK KELYCVACGK  300
KFKSDKQWKN HERSKKHKEK VAELREAFGE EDTEFEVTEG NERKNEEKED EGYLSADDGV  360
NDLRNEFEDS VGIHGLESNE ENAESNEEGG IVDIDNGSVS RLFNAELESD DDEASLLEAM  420
VSGHKTRKKV DARHQTKAPE KKIQVEVDVD ETGYMEYNNT KGSRRNKGGK RRKGRTQEEE  480
TIRADVTEAN DVTEDNGEIE EQNGRYDDSH VESTSNPVKE SANEDKGDNA SERDHDLPKQ  540
AVNKRNATKK SDVSKSKVAP KGRKHKAAAK VSGNVCEKCG EEFESRNKLH KHIGETGHAS  600
LKF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	208	KKLRKKAKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-142	C2H2 family protein