PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu014321.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 488aa MW: 53296.3 Da PI: 8.5625

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu014321.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.7	5.6e-25	177	220	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH++rgr+rsrk++e Oeu014321.1 177 DPEPGRCRRTDGKKWRCSKDAVPDQKYCERHINRGRNRSRKPVE 220 79***************************************998 PP
2	QLQ	59	1.4e-20	111	145	1	35
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 ++FT+aQ+++L++Q+l+yK+++an+PvP +L++++ Oeu014321.1 111 GPFTPAQWMELEHQALIYKHMLANVPVPYNLIMPL 145 59******************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 488 aa Download sequence
MDFGVITHQD PSPKPAGPDS TEPSNGKRHG SGNLKQDRSE NAEDTRKESK IARTTFGIFD 60 LWPSGCDDGQ KMLSFSSADL HSNGRNDTKY YSRTGGELNV GMHGSVARFR GPFTPAQWME 120 LEHQALIYKH MLANVPVPYN LIMPLLRSLY PYATSGSYAS NSLGWGPLHL GFSGSNDPEP 180 GRCRRTDGKK WRCSKDAVPD QKYCERHINR GRNRSRKPVE GLKGHAVSGS TTNVAPIASS 240 SSASVMSSSI VSNNLGSMPN RLNSFESYTA KASNNYLVNS DNKHAYGRTQ KFQSLTLTPT 300 SINPKPKEAP FSFQKQHAPF EEFSHLEFGV NSDSRVNPST KFSYVNTTNP NSFLDLESND 360 QNLVSQFIDS TDRSDLTSVS WPKKLKSDWT QLSISPMAPP DFSLPPNSPP QSKATIMPLL 420 LSPELDPVQM SLGINTIDES NHKQSTWLPV SWGISMGGPL GEVLTSTSTN AGVGNNSTVL 480 NLMTEAG*

Sequence ? help Back to Top

Protein Sequence Length: 488 aa Download sequence

MDFGVITHQD PSPKPAGPDS TEPSNGKRHG SGNLKQDRSE NAEDTRKESK IARTTFGIFD  60
LWPSGCDDGQ KMLSFSSADL HSNGRNDTKY YSRTGGELNV GMHGSVARFR GPFTPAQWME  120
LEHQALIYKH MLANVPVPYN LIMPLLRSLY PYATSGSYAS NSLGWGPLHL GFSGSNDPEP  180
GRCRRTDGKK WRCSKDAVPD QKYCERHINR GRNRSRKPVE GLKGHAVSGS TTNVAPIASS  240
SSASVMSSSI VSNNLGSMPN RLNSFESYTA KASNNYLVNS DNKHAYGRTQ KFQSLTLTPT  300
SINPKPKEAP FSFQKQHAPF EEFSHLEFGV NSDSRVNPST KFSYVNTTNP NSFLDLESND  360
QNLVSQFIDS TDRSDLTSVS WPKKLKSDWT QLSISPMAPP DFSLPPNSPP QSKATIMPLL  420
LSPELDPVQM SLGINTIDES NHKQSTWLPV SWGISMGGPL GEVLTSTSTN AGVGNNSTVL  480
NLMTEAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37740.1	3e-81	GRF family protein