PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu013349.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 472aa MW: 53267.4 Da PI: 4.9043 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.6 | 7.9e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ ++++ G+g +W + ++++g++R++k+c++rw++yl Oeu013349.1 14 KGPWSPEEDAKLKAYIEKRGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 2.1e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd l+ + G++ W+ Ia+ ++ gRt++++k++w++ Oeu013349.1 69 GGFTEEEDNLICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 472 aa Download sequence |
MGRAPCCEKA NVKKGPWSPE EDAKLKAYIE KRGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNLRHGG FTEEEDNLIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLQKKLLGK 120 QRKDQQARRG ISPKQEMKKG YENFSANECF SLYPFPPQSV VSPPFSVAYG TQTSTHIEDQ 180 ESFTGNLIVQ FGERFSYDHQ QQNNTGLINT STLHSSENTF SACTSLINST CPPLMSDYFA 240 INGVALDHFQ GTNSFPGELD EVVINGNINP LQLHGLDNFS TLMDMVTSNS TSQENCSWGD 300 ISFLDSSSIS SYEFCEQNFC AFDDQPRLIA MERRVERKEA AEREGNHVRL LEVVRNGSEN 360 QRQKLFDFFN FLPDLFWHFL AHGNFDVARE SESGDDVFGQ NVVGDETDPA VLSNFSLEQY 420 SESWTILPLD VRVPAAVFVL LWLLDDNKMK DEDRDKANVT LGSSSDPSEV Y* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49690.1 | 2e-74 | MYB family protein |