PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012885.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 585aa    MW: 64472.5 Da    PI: 5.2209
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012885.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS346.25.3e-1062185833373
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  ++L++ A  ++s d e+a + L +l+   s++gd ++R+  yf eAL+ r++++ +++    +  +t   +s+e + ++k+f++++P+ kf+hltaNq
  Oeu012885.1 218 KALVDSASLLES-DPENAAKSLIQLKGSISQHGDHIERVSYYFFEALSYRISNQAEKIP---TIYDT---TSEEYILSYKAFNDACPYSKFAHLTANQ 308
                  678888887776.8888999999******************************333333...33344...4889************************ PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLr 195
                  aIlea+e+++++Hi+Df++ qG+QW+aLlqaLa+R++g+p  +Ri g+ +++ g  s+ +l +tg+rL++fA+ l++++ef++ +   +++l+ +++r
  Oeu012885.1 309 AILEATESAKKIHIVDFGVIQGVQWAALLQALATRSAGKPeGIRISGIPAQALGdsSAATLLATGNRLRDFAKLLDLNLEFEP-ILIPVQELNGSSIR 405
                  ************************************776659********887799999************************.6889********** PP

         GRAS 196 vkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgre 293
                  ++p+E+laVn++lql++lldes +  +   + Lkl ksl+P vv++ e e+++n+  Fl+rf +al+yy+a+f+sl++++ ++s er  vEr ++gr+
  Oeu012885.1 406 TDPDEVLAVNFMLQLYSLLDESNECVE---AALKLAKSLNPIVVTLGEYEVSLNRVGFLHRFKNALKYYTAVFESLDTNMTSDSLERLQVERLIFGRR 500
                  *******************99999888...9******************************************************************* PP

         GRAS 294 ivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                  i  +v  e  + rrer+e + +Wr  +e+aGF++++ls++a++qa++ll k++  + y++  +s  ++ l W++ +L+++S+W
  Oeu012885.1 501 IAGLVGSEDPRtRRERMEDKDSWRFLMENAGFQSLKLSHYAMSQANMLLWKYNyRKMYKLVVSSPGFLsLAWNHVSLLTISSW 583
                  ******998877*****************************************9999***988877777************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIL QKQQQEQQQQ HHHHHDHPFC LSTTTTSATT SMSHGLIGPG  60
AFTDPFQLPG AGPEPIEPGF QFPTMEHHST GFRYSDLCGE FDSDEWMESL MGGGDSTGSS  120
NIQSNCEAWQ TLYSTADAFT NCPPSRLSVN SNLNRVILSE PPQNTTWVSV SSATPPPALP  180
PVADSRPASK NDASVADNTT GASTSSPDDS FSTKPILKAL VDSASLLESD PENAAKSLIQ  240
LKGSISQHGD HIERVSYYFF EALSYRISNQ AEKIPTIYDT TSEEYILSYK AFNDACPYSK  300
FAHLTANQAI LEATESAKKI HIVDFGVIQG VQWAALLQAL ATRSAGKPEG IRISGIPAQA  360
LGDSSAATLL ATGNRLRDFA KLLDLNLEFE PILIPVQELN GSSIRTDPDE VLAVNFMLQL  420
YSLLDESNEC VEAALKLAKS LNPIVVTLGE YEVSLNRVGF LHRFKNALKY YTAVFESLDT  480
NMTSDSLERL QVERLIFGRR IAGLVGSEDP RTRRERMEDK DSWRFLMENA GFQSLKLSHY  540
AMSQANMLLW KYNYRKMYKL VVSSPGFLSL AWNHVSLLTI SSWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein