PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012464.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26126.6 Da    PI: 5.722
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012464.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.15.6e-29959151
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                 k+i+n + rqvtfskRr g++KKAeELSvLCda+va+iifsstgkl+ey+s
  Oeu012464.1  9 KKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEYAS 59
                 68***********************************************86 PP
2K-box51.83.5e-189217319100
        K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                   +++kL+kei +  +++Rh+ Ge+L+ L ++eLq+Le+ Le +l+++ +kK e ++++i++lq+k  +l een++Lr++++e
  Oeu012464.1  92 SNHSKLNKEIAEKSHQLRHMRGEELQGLCIEELQHLERSLEVGLNRVIEKKGEKIMKEINRLQEKGMQLVEENERLRQQVME 173
                  5789***************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSVLCD ADVALIIFSS TGKLFEYASS  60
SMKEILERHN LHSKNLEKME QPSLELQLVE DSNHSKLNKE IAEKSHQLRH MRGEELQGLC  120
IEELQHLERS LEVGLNRVIE KKGEKIMKEI NRLQEKGMQL VEENERLRQQ VMEISNGRKN  180
MTETDIENII YEEGQSLESV TNNCNSSGPP QDDDSSDTSL KLGLPYSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-100MIKC_MADS family protein