PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu012394.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 297aa    MW: 34138.7 Da    PI: 4.7825
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu012394.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.7e-1855108356
                  --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  k+++++ +q+++Le+ Fe ++++  +++ +LA++lgL+ rqV vWFqNrRa++k
  Oeu012394.1  55 KKRRLNVDQVKALEKNFELENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWK 108
                  4568999**********************************************9 PP
2HD-ZIP_I/II126.31.4e-4054144191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  +kkrrl+ +qvk+LE++Fe e+kLep+rKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy  Lk++yd+lk + e+L++++e+L +++
  Oeu012394.1  54 QKKRRLNVDQVKALEKNFELENKLEPDRKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKASYDSLKLNYETLQSDNEALFRKI 144
                  69***********************************************************************************998766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MKRFGSSDSL GALMPICPNT TDEHEQGNNH VYAKEFRSMF EGLDEEGCVE ELGQKKRRLN  60
VDQVKALEKN FELENKLEPD RKVKLAQELG LQPRQVAVWF QNRRARWKTK QLERDYGLLK  120
ASYDSLKLNY ETLQSDNEAL FRKILDLKSK LDEGTESKGS VKKEAVKSES GEKRNAKSDS  180
DANFENFKEN RSSDSTDYSS AILNEETNNS PTAAISSFTK DVILHQSPHE DFLDIVKNMN  240
CSFQFSDTLE DVQKSYMPQF VKIEEHNFFS SEESCSTFFS DDQAPNLHWY CSDEWN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15584KKRRLNVDQVKALEKNFELENKLEPDRKVK
2103111RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22430.12e-51HD-ZIP family protein