PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011942.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 436aa MW: 50487.4 Da PI: 6.8884

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011942.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.2	4.5e-23	117	214	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li+ ++++ e+ ++ +kk++W+ vsk+m++rg +sp+qC++k+++lnkryk+++e+ +++ ++e++++ ++d+++ Oeu011942.1 117 KWTDTMVRLLITSVSYISEEAASEDgggvrrkcsnlQKKGKWKLVSKVMAQRGHFVSPQQCEDKFNDLNKRYKRLNEILGRGtSCEVVENPMLLDRMD 214 7************888888765445666667888******************************************669*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MEGNFSSGSM MQGNGSYVDF DLRGPMRVHH GQQHTLALHQ QHHQPHAGQG SSTVLPTIHA 60 NFPLTLGRMQ DRDKTVSQAD YSERERGKSA SDEDEQTCME ENDLSRGKKA SPWQRVKWTD 120 TMVRLLITSV SYISEEAASE DGGGVRRKCS NLQKKGKWKL VSKVMAQRGH FVSPQQCEDK 180 FNDLNKRYKR LNEILGRGTS CEVVENPMLL DRMDHISAKA KEEVLKILSS KHLHYEEMCS 240 YHNGNRLHLP PDPELQHSLR LALRSRDNED EDVKRHTQDD DEEIELDGRD ESEENPVLFG 300 DHRAYKTPGS SAKRIKQCHK HEQLGFGNSL DGNRTSNIQQ ENAGADTTQV QTEGMKENML 360 QKQWINHRTL QLEEKRLHIQ SQMLELEKER FKWQRFCQKK DRELEMTRLE IENMKLENER 420 MAFELRQKEI GFDNR*

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MEGNFSSGSM MQGNGSYVDF DLRGPMRVHH GQQHTLALHQ QHHQPHAGQG SSTVLPTIHA  60
NFPLTLGRMQ DRDKTVSQAD YSERERGKSA SDEDEQTCME ENDLSRGKKA SPWQRVKWTD  120
TMVRLLITSV SYISEEAASE DGGGVRRKCS NLQKKGKWKL VSKVMAQRGH FVSPQQCEDK  180
FNDLNKRYKR LNEILGRGTS CEVVENPMLL DRMDHISAKA KEEVLKILSS KHLHYEEMCS  240
YHNGNRLHLP PDPELQHSLR LALRSRDNED EDVKRHTQDD DEEIELDGRD ESEENPVLFG  300
DHRAYKTPGS SAKRIKQCHK HEQLGFGNSL DGNRTSNIQQ ENAGADTTQV QTEGMKENML  360
QKQWINHRTL QLEEKRLHIQ SQMLELEKER FKWQRFCQKK DRELEMTRLE IENMKLENER  420
MAFELRQKEI GFDNR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-125	Trihelix family protein