PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu011501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 29481.9 Da PI: 5.6255 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+ +++q+G g+W++ ++ g+ R++k+c++rw +yl Oeu011501.1 14 KGPWSPQEDLILISYIQQHGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.5 | 2.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++++++ G++ W++Ia++++ gRt++++k+ w+++l Oeu011501.1 67 RGNFSKEEEETIIKLHEMIGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 261 aa Download sequence |
MVRAPCCQKM GLKKGPWSPQ EDLILISYIQ QHGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF SKEEEETIIK LHEMIGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKNSN 120 TSEDSNRNSI IQKCDSSKAP GNPNSSSEQI VDSPQHCSSE MSSVTDSYEK TVTNHEEMDN 180 SSEYFPQIDE TFWSDDFSTD VNINMQSSNF PAAANDKVQF EFPSSPLENA AAGNLMVDDS 240 MDFWYNVFIG AGDMPDLPVF * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23250.1 | 8e-85 | MYB family protein |