PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu011110.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 232aa MW: 25641.6 Da PI: 7.5077

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu011110.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.2	1.9e-18	14	59	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+++Ed lv++v+++G+++W++I+ ++ gR++k+c++rw + Oeu011110.1 14 KGSWSPQEDATLVKLVHEHGPRNWSLISLGIP-GRSGKSCRLRWCNQ 59 799***************************.*********985 PP
2	Myb_DNA-binding	53.3	6.2e-17	68	110	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T+ Ed +++a++ +G++ W+tIar ++ gRt++ +k++w++ Oeu011110.1 68 PFTPSEDATILRAHAVHGNR-WATIARLLP-GRTDNAIKNHWNST 110 89****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MEGGGGGGGG EKTKGSWSPQ EDATLVKLVH EHGPRNWSLI SLGIPGRSGK SCRLRWCNQL 60 SPEVQHRPFT PSEDATILRA HAVHGNRWAT IARLLPGRTD NAIKNHWNST LRRKRNNQND 120 NKRSWDESGT MSTERESACK RRQCSHVSPE QSGCGGTEET SITLTLLPPG EGEKVEVIKE 180 EEEEEEGKSM MDVEETCLVT IMQRMIAREV RSYIDKLRGQ GGLGSPERSV N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37260.1	1e-52	MYB family protein