PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 624aa MW: 68771.5 Da PI: 5.9727 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl Oeu010863.1 14 KGPWTPEEDIILVSYIQEHGPGNWRAVPTNTGLLRCSKSCRLRWTNYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 47.2 | 5.2e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Oeu010863.1 67 RGNFTEHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 112 89********************.*********.************996 PP | |||||||
3 | Myb_DNA-binding | 47.2 | 5.2e-15 | 361 | 406 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Oeu010863.1 361 RGNFTEHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNFWNTHL 406 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 624 aa Download sequence |
MGRPPCCDKI GVKKGPWTPE EDIILVSYIQ EHGPGNWRAV PTNTGLLRCS KSCRLRWTNY 60 LRPGIKRGNF TEHEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNFWNT HLKKKLKKQQ 120 GNDEQNQEGS SDSQSIPKGQ WERRLQTDIH MAKQALCEAL SLDKWNTNLL DSKPFPVTLS 180 ETKPIQTSTY ASSTENIARL LQNWTKKSPN SSQAGSSQST TQTSFNNPSI GTSSSPSEGT 240 ISATTPEGFD SFMGFSSSNS DVSQSEGEPK VNAANFIPEA GTLQGESKIN LDIQMPLTLL 300 ENWLFDDASA QGGGGYIMDM SLGENADLQK CPNQCLLHLD RAQKDGIFHI LGEHKVPGIK 360 RGNFTEHEEK MIIHLQALLG NRWAAIASYL PQRTDNDIKN FWNTHLKKKL KKQQGNDEQN 420 QEGSSDSQSI PKGQWERRLQ TDIHMAKQAL CEALSLDKWN TNLLDSKPFP VTLSETKPIQ 480 TSTYASSTEN IARLLQNWTK KSPNSSQAGS SQSTTQTSFN NPSIGTSSSP SEGTISATTP 540 EGFDSFMGFN SSNSDVSQSE GEPKVNAANF IPEAGTVQGE SKINLDIQMP LTLLENWLFD 600 DASAQGGGGY IMDMSLGENA DLF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62470.2 | 1e-107 | MYB family protein |