PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010468.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 172aa MW: 18623 Da PI: 8.8601 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.1 | 1.5e-05 | 19 | 41 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ CgksFs+ L H +H Oeu010468.1 19 YTCGVCGKSFSSYQALGGHKTSH 41 9***********99998888777 PP | |||||||
2 | zf-C2H2 | 15 | 7e-05 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C ++F++ L H+r+H Oeu010468.1 70 HKCNVCYMTFTTGQALGGHMRRH 92 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MEPFPPAIIA SPQDQNISYT CGVCGKSFSS YQALGGHKTS HRDRSQFVTT TAITNTSNMI 60 PYLNPSGRIH KCNVCYMTFT TGQALGGHMR RHYEGVIKGG KKTGGITSKG GTSSQCNCNG 120 CTSTVDFNLN LLPAVPETYS DFTLYSGERL QVLSDQKKVE SHIPFKKQSL D* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19580.2 | 1e-23 | C2H2 family protein |