PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010436.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 171aa    MW: 18690.9 Da    PI: 9.2387
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010436.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.93.7e-051941123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C+ CgksFs+   L  H  +H
  Oeu010436.1 19 YICSVCGKSFSSYQALGGHKTSH 41
                 89**********99998888777 PP
2zf-C2H216.81.9e-056991123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 +kC+ C+++F++   L  H+r+H
  Oeu010436.1 69 HKCTVCNQTFTTGQALGGHMRRH 91
                 79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MEPFSPAIVA SPLDQNMPYI CSVCGKSFSS YQALGGHKTS HRDRSQFATT TAITSTSNIS  60
YLNPSGRIHK CTVCNQTFTT GQALGGHMRR HYEGEIKGGK KTSGIISRGG ASSQCNSNGR  120
TSTVDFNLNQ PALLETYSDF TLYIRQNIQV LGDQHKVESH IPFKKQRLDE *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-22C2H2 family protein