PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu010401.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 261aa MW: 28970.8 Da PI: 5.0665 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.8 | 1.2e-18 | 11 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W+ eEdell ++v+++G ++W++I+r ++ gR++k+c++rw + Oeu010401.1 11 KGPWSVEEDELLQKLVQRHGVRSWSLISRSIP-GRSGKSCRLRWCNQ 56 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.5 | 3.1e-18 | 65 | 106 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eEde++++a +++G++ W+tIar ++ gRt++++k++w++ Oeu010401.1 65 PFTPEEDEIILKAQAEFGNK-WATIARLLN-GRTDNSIKNHWNS 106 89******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MTAIEGCNKI KGPWSVEEDE LLQKLVQRHG VRSWSLISRS IPGRSGKSCR LRWCNQLSPE 60 VEHRPFTPEE DEIILKAQAE FGNKWATIAR LLNGRTDNSI KNHWNSRLKR KCAAASVDGD 120 ERPLQVLRRA NSVDVTGVVT NGFTVSPESL SPSGSEISDS IENVLAYTNT NMNFYFPIPV 180 IGNAVFAPPV ESSPVVMEND NADDPLTELT LSLPGSRNEF AMPVVAEKEN KSETLSFGLE 240 LSTVLQEMIK KEVRNYLLEQ * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 1e-73 | MYB family protein |