PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu010109.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 279aa    MW: 31825.6 Da    PI: 7.7832
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu010109.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00025173123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C + F++   L  H+++H
  Oeu010109.1 51 YSCSFCRREFRSAQALGGHMNVH 73
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEQARYWMWG KRKNDLNSRG FASYGDSWEE QAFAEDAARA LGGCTWPPRS YSCSFCRREF  60
RSAQALGGHM NVHRRDRARL KQSSIPQTED LPHNHFGLQF PSQICTLLYN PNPDFSDPEV  120
LASPSSHIRV SAPSRKANSD EAIPVLRFFS KRLEDYQKNI VSSPPASWSS FIAEKDTRVL  180
DLYNEERKSK ASEPDIKAKE DCAMDDLDTN RRQTNESSSD EELAGCKRRR IDLRPLTFLQ  240
KSSAVERCHP QLEVLKVRSS TIEELDLELR LGEAPKLK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227231KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-26C2H2 family protein