PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu009563.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 184aa MW: 20525.7 Da PI: 8.3198 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 64.1 | 2.8e-20 | 34 | 79 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l++ v+++Gg++W++I+++++ gR++k+c++rw + Oeu009563.1 34 KGPWSAEEDQILIRMVERYGGRNWSLISKYVN-GRSGKSCRLRWCNQ 79 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 57.2 | 3.9e-18 | 88 | 130 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +++++Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ Oeu009563.1 88 PFSADEDETILAAHAEYGNR-WATIARLLP-GRTDNAVKNHWNST 130 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MDPFYRCTSS VTSASSSDSS SESSLSQRNS ERVKGPWSAE EDQILIRMVE RYGGRNWSLI 60 SKYVNGRSGK SCRLRWCNQL SPTVEHRPFS ADEDETILAA HAEYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRKYQHKQV VEKSTDSTVN VASGSRMCSV SNDFDEEYDP MTALSLAPPG 180 LGR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50060.1 | 2e-60 | MYB family protein |