PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu009265.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 557aa    MW: 61185.5 Da    PI: 5.0977
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu009265.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS454.95e-1391885511374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv++L++cAeav+ ++++la+al++++  la ++  +m+++a+yf+eALa+r+++        + p+++ e++ s++l++   f+e +P+lkf+h+ta
  Oeu009265.1 188 LVHTLMACAEAVQRDNMKLADALVKHVGILAVSQVGAMRKVATYFAEALARRIYK--------IYPQDSLESSYSDVLQM--HFYESCPYLKFAHFTA 275
                  689****************************************************........44555555556666555..4*************** PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  NqaIlea++g++ vH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++++k++l+ +g++La++Ae++gv+f+f+ +va++l+dl+ ++L++
  Oeu009265.1 276 NQAILEAFAGANSVHVIDFSLKQGMQWPALMQALALRPGGPPEFRLTGIGPPQPDDKDALQLVGWKLAQLAEKIGVEFKFRGFVANSLADLDANMLDI 373
                  ************************************************************************************************** PP

         GRAS 197 kp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpreseerikvErellg 291
                  kp   Ea+aVn+v++lhrll++++ +++    vLk +k ++Pk+v++ve+ea+hn++ Fl+rf e+l+yys++fdsl +++l + ++e+ ++ ++++g
  Oeu009265.1 374 KPsnVEAVAVNSVFELHRLLARPGGIDK----VLKSIKAMNPKIVTIVEEEANHNGNVFLDRFNESLHYYSTMFDSLeSSGLTQPNSEDLVMTEVYFG 467
                  **999***************99998888....*********************************************88889999************* PP

         GRAS 292 reivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  r+i+nvvaceg +r+erhetl++Wr r+++aGF pv+l+++a kqa++ll+ ++ +dgyrvee++gsl+lgW++rpL+++SaW+
  Oeu009265.1 468 RQICNVVACEGPDRIERHETLSQWRGRMNSAGFDPVHLGSNAFKQASMLLALFAgGDGYRVEENDGSLMLGWHTRPLIATSAWQ 551
                  ***********************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MKRDRDLGKA AAAAAGKMKI WEEGQPKVDA GMDELFAVLG YKVKSSDMAD VANKLEQLEM  60
AMLTTMEDGI SYLSTDTIHY NPSDLSGWVE SLLSELGSTG ESSSNLIGFS NDMPKQQNRK  120
VIYDYDLRAI PGGAICSSRN DEENPNHEPD IGTKRLRSSP GSEFLDNASL AAARPVVLVD  180
SQETGVRLVH TLMACAEAVQ RDNMKLADAL VKHVGILAVS QVGAMRKVAT YFAEALARRI  240
YKIYPQDSLE SSYSDVLQMH FYESCPYLKF AHFTANQAIL EAFAGANSVH VIDFSLKQGM  300
QWPALMQALA LRPGGPPEFR LTGIGPPQPD DKDALQLVGW KLAQLAEKIG VEFKFRGFVA  360
NSLADLDANM LDIKPSNVEA VAVNSVFELH RLLARPGGID KVLKSIKAMN PKIVTIVEEE  420
ANHNGNVFLD RFNESLHYYS TMFDSLESSG LTQPNSEDLV MTEVYFGRQI CNVVACEGPD  480
RIERHETLSQ WRGRMNSAGF DPVHLGSNAF KQASMLLALF AGGDGYRVEE NDGSLMLGWH  540
TRPLIATSAW QLKPPE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein