PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008492.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 31869.6 Da PI: 4.669 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.8 | 4.6e-17 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ +Ed +l+ +v+ +G g W++ ar g++Rt+k+c++rw++yl Oeu008492.1 22 KGPWSSDEDSKLIYYVTIHGEGGWEALARNAGLRRTGKSCRLRWLNYL 69 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.9 | 3.6e-16 | 75 | 119 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T+eE++ +++++ q+G++ W+ Ia++++ gRt++++k++w+++ Oeu008492.1 75 RGNITPEEQLHIIELHLQYGNR-WTEIAKRLP-GRTDNEIKNFWRTV 119 7999******************.*********.***********985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MDAKEIYGNS TAQKEEEITI RKGPWSSDED SKLIYYVTIH GEGGWEALAR NAGLRRTGKS 60 CRLRWLNYLN PNVRRGNITP EEQLHIIELH LQYGNRWTEI AKRLPGRTDN EIKNFWRTVI 120 KKQAKQLKCD VNSVEFRDIL RSIWLPSILK EQMHPKIEAN LESQLNSTVT EVSTDFDNMN 180 CQKLMTESEV HQTGFLPVEM NCQSNKSNVS VLDDFEDVNW YYDCLSEQKF GSEVVYSPFI 240 YGFDGNEIQS EDSLIISLND EDFWDSTLTS FNQF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 2e-63 | MYB family protein |