PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu008456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 285aa MW: 31675.1 Da PI: 4.8982 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.1 | 3.1e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l ++++ G g+W++ ++ g+ R++k+c++rw +yl Oeu008456.1 14 RGRWTAEEDQILTNYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 56 | 8.9e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ eE+e++v++++ lG++ W++Ia +++ gRt++++k++w+++l Oeu008456.1 67 RGSMSSEEEEIIVKLHASLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 8999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence |
MGRAPCCEKV GLKRGRWTAE EDQILTNYIQ ANGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRPDLKRGSM SSEEEEIIVK LHASLGNRWS LIAGHLPGRT DNEIKNYWNS HLSRKIYSFR 120 QTYPNFTSPA KAQGVANKRR GGRTSRSTNV SKSSEQVKEI DVGNAAVAMT SSEKEALSST 180 ISWTEISAVE EVMETIDTPP NNEGMGMLHL DDIIVDSNRI STSDHEERGE GIITDGILPT 240 DNLGFSSGEN GFEWDWESDD AITGGNEVWG LEENTFSWLW DSNG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 9e-78 | MYB family protein |