PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu007800.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 284aa    MW: 31823.4 Da    PI: 7.6137
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu007800.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.000466284123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y C+ C + F++   L  H+++H
  Oeu007800.1 62 YNCSFCRREFRSAQALGGHMNVH 84
                 89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEQVGYWTWA AAESKRKYEL SSHHVLAPAA TATSHGDSWE EQAFAEDASG LLGGCIWPPR  60
SYNCSFCRRE FRSAQALGGH MNVHRRDRAR LRQSPVPQTY ELVLIPCQSF EFHEYPSRSD  120
QIYTFFYHSA NSDSDPDPVR VSDQNQKVSS QKRVSSHGSI SPIIPEHHHK NMVSLSIPSS  180
SGKKPKISES SNRAKEDYPA LDSSESLNPT LTNTSSDEEV ASCKRRRIDA NPLIFFQKPS  240
PVLDRCHPQS EMHKLCSSST EELDLELRLG VKGNLKNGTY KSL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224228KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.14e-26C2H2 family protein