PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu007730.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 386aa MW: 42649.2 Da PI: 8.4792

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu007730.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.4	3.2e-07	220	242	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H Oeu007730.1 220 HYCQVCGKGFKRDANLRMHMRAH 242 68*******************99 PP
2	zf-C2H2	10.7	0.0017	314	337	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ k Fs s+L++H + + Oeu007730.1 314 YVCKRCNsKQFSVLSDLRTHEKHC 337 9*******************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MITGTTSSCY PNGTQGLPLY GVPHHQEVVS SSLDLNPSVS STNHASSFLY NLSVLKDKIH 60 QAHSLGSLFL TSDHGQLPDS TAIALPTMGT LIQEIIVTAS SMMYSCQQMA HGGAPPPASP 120 ITDELHHQQT VMIDGSGGDC VDHQGFYSND TVLDWYGANY NSNSTDTPKK SIAVTSNRTE 180 VFEKETPQKT ENNEEIVGLL PNNCDIIELD AADLLAKYTH YCQVCGKGFK RDANLRMHMR 240 AHGDEYKSSA ALINPMKSKA YSSGTDELFN KLPRKYSCPH QGCRWNKSHK KFRPLKSMIC 300 VKNRYRRSHC PKMYVCKRCN SKQFSVLSDL RTHEKHCGDQ KWQCSCGTTF SRKDKLMGHV 360 ALFVGHTPAI NSLSRLGNGA QNKIN*

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MITGTTSSCY PNGTQGLPLY GVPHHQEVVS SSLDLNPSVS STNHASSFLY NLSVLKDKIH  60
QAHSLGSLFL TSDHGQLPDS TAIALPTMGT LIQEIIVTAS SMMYSCQQMA HGGAPPPASP  120
ITDELHHQQT VMIDGSGGDC VDHQGFYSND TVLDWYGANY NSNSTDTPKK SIAVTSNRTE  180
VFEKETPQKT ENNEEIVGLL PNNCDIIELD AADLLAKYTH YCQVCGKGFK RDANLRMHMR  240
AHGDEYKSSA ALINPMKSKA YSSGTDELFN KLPRKYSCPH QGCRWNKSHK KFRPLKSMIC  300
VKNRYRRSHC PKMYVCKRCN SKQFSVLSDL RTHEKHCGDQ KWQCSCGTTF SRKDKLMGHV  360
ALFVGHTPAI NSLSRLGNGA QNKIN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22890.1	1e-103	C2H2 family protein