PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu006877.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 279aa    MW: 31614.4 Da    PI: 7.1791
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu006877.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00025173123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C+ C + F++   L  H+++H
  Oeu006877.1 51 YSCSFCRREFRSAQALGGHMNVH 73
                 99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MEQTRNWMWE KKKGDLNSHV FASYGDSWEE QAFAEDAAGA LGGCTWPPRS YSCSFCRREF  60
RSAQALGGHM NVHRRDRARL KQSPIPQTED LTHNHVDLQF PSQICTLLYN PNPDFSDPEI  120
LASPSSHIRV SALPTKANSD EKLPGLRFFS RRLEVNQKNN VSSPPASWSS FIAEKDAEVF  180
NLYNEERKSK TLEPYTKAKQ DCPTDDLAVY RTRTNESSSD EEVAGCKRRR IDLRPLTFLQ  240
KSSHVEICHP QLEVLKVCSS TIEELDLELR LGGAPKVK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227231KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.15e-27C2H2 family protein