PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu006157.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 245aa MW: 27206.2 Da PI: 8.3204 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.5 | 1.5e-18 | 40 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+W++eEd +l ++v q+G ++W++I++++ gR++k+c++rw + Oeu006157.1 40 RGPWSAEEDNILTRLVDQYGARNWSLISKYIK-GRSGKSCRLRWCNQ 85 89*****************************9.***********985 PP | |||||||
2 | Myb_DNA-binding | 59.5 | 7.3e-19 | 92 | 136 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r ++T+eEde ++ a+ ++G++ W+tIar ++ gRt++ +k++w++ Oeu006157.1 92 RRPFTAEEDETILAAHSRYGNK-WATIARLLP-GRTDNAVKNHWNST 136 679*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MEALNRSPSV SSSSTDSESS ESLIYGNKTS GNLHISERIR GPWSAEEDNI LTRLVDQYGA 60 RNWSLISKYI KGRSGKSCRL RWCNQLSPNV ERRPFTAEED ETILAAHSRY GNKWATIARL 120 LPGRTDNAVK NHWNSTLKRK SLQKQIQEQS MDCVKDIASG SNNGKHNQII NNAGVCPMSS 180 GFDDYNDPMT ALTLAPPGTG GDGMPEMRPE SSQDGFWDAM RNVIAREVRE YVNTSFSKAS 240 SQFH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 9e-57 | MYB family protein |