PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu005327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 177aa MW: 20259 Da PI: 9.2449 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.2 | 8e-20 | 60 | 113 | 2 | 55 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 rk+ ++tk+q ++Lee F++n++++ +++e LA++l+L+ rqV vWFqNrRa++ Oeu005327.1 60 RKKLRLTKDQSRVLEESFRQNHTLNPKQKEGLAEQLKLKPRQVEVWFQNRRARR 113 78889***********************************************96 PP | |||||||
2 | HD-ZIP_I/II | 82.2 | 7.5e-27 | 60 | 120 | 1 | 61 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEk 61 +kk+rl+k+q+++LEesF+++++L+p++K+ la++L+l+prqv+vWFqnrRAR +k++E+ Oeu005327.1 60 RKKLRLTKDQSRVLEESFRQNHTLNPKQKEGLAEQLKLKPRQVEVWFQNRRARRLKKEVEE 120 69****************************************************9999996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEISSDDFSC LELTIAMPGF SSSPSPQSYG NQQALYNDIN SFFSIYRERM EEEYETQNPR 60 KKLRLTKDQS RVLEESFRQN HTLNPKQKEG LAEQLKLKPR QVEVWFQNRR ARRLKKEVEE 120 LRGMNVRPPN ISQQQPAATL TMCPRCERVA TTFLDKGPAT TTSTTPTKII QPSAAC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 3e-44 | HD-ZIP family protein |