PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu004739.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 203aa MW: 22663.6 Da PI: 7.4438 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.5 | 6.5e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEdellv++++++G g+W++ ++ g+ R++k+c++rw +yl Oeu004739.1 15 KGTWTKEEDELLVNYIALHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 62 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 24.8 | 5.2e-08 | 68 | 107 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEde+++++ + + I r++ gRt++++k++w+++ Oeu004739.1 68 RGNFTQEEDEIIIKLLACWE------ITRRLS-GRTDNEIKNYWNTH 107 89**************9887......66****.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MGRSPCCELE AHTNKGTWTK EEDELLVNYI ALHGEGCWRS LPKAAGLLRC GKSCRLRWIN 60 YLRPDLKRGN FTQEEDEIII KLLACWEITR RLSGRTDNEI KNYWNTHIKR KLIHRGIDPQ 120 THLPLKNATP TPTADKNRIC LSLRSPTPSS SGTIEETQPH SQLQHEQNAA VAVDLELSIG 180 LPSYSTTASD ETTTTTADIG AC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 2e-70 | MYB family protein |