PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004567.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 557aa MW: 62486.1 Da PI: 8.8348

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004567.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00028	487	509	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp C+++F++ L H r+H Oeu004567.2 487 HVCPFCDRVFKNGQALGGHKRSH 509 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MAEEQELRFV CKLCNKRFPC GKSLGGHTRS HVIANSAESE EKFESNMKRI SSLGGAGKII 60 INESKVVEFA NGQSIYGLRE NPKKTWRAVD STFPLPQEKV CKQCGKGFQS LKALCGHMAC 120 HSERERGLKD DHSWTSENQK LVMDSHSDTE SEDRILRTRL SKSKRFKKII VKSSSFSLAN 180 NGSSSVSEID EQEQEEVAMC LMMLSRDSGT KGGVNSVVES SDNNSVVLET KSSSIDMIIG 240 RKEGLNYVNN NDETLQMKKI GDRMFKGRAL NAEIAQMEKS DSGYFLDECA KVESDGSVDG 300 YHRNGAFGEW KKPPMGVGVR GEEPVSEFKK SLNVIKSYKT ELRKEVAQEN GYDDARKFSN 360 SARNESRKRK HRFEVPGFWN ESDRNMKKGS SDDQVCDNVQ KKSKYECLNC KKTFNSYQAL 420 GGHRPCHKKS NAFSESQYET GENSQGDVND FRTAYKLGES TNKKKLISKI SSHDSKKGIK 480 SKKNKLHVCP FCDRVFKNGQ ALGGHKRSHF IGGHEETSSR TPVLKPELPD LLDLNLPAPE 540 VDEDDGHDQF FRLGWK*

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MAEEQELRFV CKLCNKRFPC GKSLGGHTRS HVIANSAESE EKFESNMKRI SSLGGAGKII  60
INESKVVEFA NGQSIYGLRE NPKKTWRAVD STFPLPQEKV CKQCGKGFQS LKALCGHMAC  120
HSERERGLKD DHSWTSENQK LVMDSHSDTE SEDRILRTRL SKSKRFKKII VKSSSFSLAN  180
NGSSSVSEID EQEQEEVAMC LMMLSRDSGT KGGVNSVVES SDNNSVVLET KSSSIDMIIG  240
RKEGLNYVNN NDETLQMKKI GDRMFKGRAL NAEIAQMEKS DSGYFLDECA KVESDGSVDG  300
YHRNGAFGEW KKPPMGVGVR GEEPVSEFKK SLNVIKSYKT ELRKEVAQEN GYDDARKFSN  360
SARNESRKRK HRFEVPGFWN ESDRNMKKGS SDDQVCDNVQ KKSKYECLNC KKTFNSYQAL  420
GGHRPCHKKS NAFSESQYET GENSQGDVND FRTAYKLGES TNKKKLISKI SSHDSKKGIK  480
SKKNKLHVCP FCDRVFKNGQ ALGGHKRSHF IGGHEETSSR TPVLKPELPD LLDLNLPAPE  540
VDEDDGHDQF FRLGWK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	367	404	RKRKHRFEVPGFWNESDRNMKKGSSDDQVCDNVQKKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	9e-50	C2H2 family protein