PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004449.3

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 418aa MW: 45871 Da PI: 7.962

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004449.3	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.4	6.5e-41	124	200	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ dls akeyhr+hkvC+ hsk+p v+v gle+rfCqqCsrfh+lsefDe+krsCrrrL++hn+rrrk+q Oeu004449.3 124 CQVEGCDIDLSAAKEYHRKHKVCDGHSKSPRVIVGGLEHRFCQQCSRFHSLSEFDEKKRSCRRRLSDHNARRRKPQR 200 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MEFDSKWDLE TITTFNSKTS GSLRKMQSAD WMIGDDGEID VGSFNLSTDG GNCSTSGSYA 60 GRGSSTKSTI SASTDSSLKD GMKLLGSDAG SHVKSVTTSV VPTSSTTTMK KTKLSGQIVP 120 IPYCQVEGCD IDLSAAKEYH RKHKVCDGHS KSPRVIVGGL EHRFCQQCSR FHSLSEFDEK 180 KRSCRRRLSD HNARRRKPQR QTIEFNSSRL SSQLYDGRQQ MNFLVNNAPL INPITTENST 240 WDSSCSSKFT LTRDYPVKSR RAEGIDGEMH MPGTKLPHGV NIHGGLLACK DYTSEFFNSD 300 LSIFSFTGFR GPTILSHTDA APDYRCALSL LSSNSWASSP DSIPPHRPMH ENNPGMAQHV 360 NHSSPGGMPL TSSEFWLTGQ QSTHPQSYAM AANSNFQDIQ VFKSPYEAAD IYSNALN*

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MEFDSKWDLE TITTFNSKTS GSLRKMQSAD WMIGDDGEID VGSFNLSTDG GNCSTSGSYA  60
GRGSSTKSTI SASTDSSLKD GMKLLGSDAG SHVKSVTTSV VPTSSTTTMK KTKLSGQIVP  120
IPYCQVEGCD IDLSAAKEYH RKHKVCDGHS KSPRVIVGGL EHRFCQQCSR FHSLSEFDEK  180
KRSCRRRLSD HNARRRKPQR QTIEFNSSRL SSQLYDGRQQ MNFLVNNAPL INPITTENST  240
WDSSCSSKFT LTRDYPVKSR RAEGIDGEMH MPGTKLPHGV NIHGGLLACK DYTSEFFNSD  300
LSIFSFTGFR GPTILSHTDA APDYRCALSL LSSNSWASSP DSIPPHRPMH ENNPGMAQHV  360
NHSSPGGMPL TSSEFWLTGQ QSTHPQSYAM AANSNFQDIQ VFKSPYEAAD IYSNALN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	197	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-47	SBP family protein