PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu004240.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 795aa    MW: 90629.3 Da    PI: 7.6191
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu004240.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-08421462240
                      SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                       +W +eE e l ++v+++++g   +W+ I++++g+gR+ +++
      Oeu004240.2 421 SPWGKEEIEMLRKGVQKYPKGtsrRWEVISEYIGTGRSVEEI 462
                      58***********************************99876 PP
2Myb_DNA-binding21.64.9e-07540585447
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      W+   ++ lv+  k ++++   +W+++a+ ++ g+t +qck ++ ++
      Oeu004240.2 540 WSDLQEKALVQSLKTFPKEtnqRWERVAAAVP-GKTVNQCKKKFAML 585
                      999999***********99*************.*********99766 PP
3Myb_DNA-binding21.64.9e-07684729447
                      S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 
                      W+   ++ lv+  k ++++   +W+++a+ ++ g+t +qck ++ ++
      Oeu004240.2 684 WSDLQEKALVQSLKTFPKEtnqRWERVAAAVP-GKTVNQCKKKFAML 729
                      999999***********99*************.*********99766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 795 aa     Download sequence    
MATRKSLQLI TFSQEIVDGE PIYVSSNSLP IKAFNREPAG HAFHAAALRL IGHVEETNAD  60
NEKKNEGSNE KEQDYRQTWD SYSNKGKKKS GSEGKEQDHY ALLGLGHLRY LATEEQIRKS  120
YRETALRHHP DKRAALLLAE ETEAAKQAKK DEIESHFKAV QEAYEVLIDP VKRRIYDSTD  180
EFDDEIPFEC APQDFFKVFG PAFLRNGRWS VHQPIPTLGD ENSTFEEVDS FYDFWYSFKS  240
WREFPHADEF DVEQAESRDH KRWMERQNAK LTEKARKEEY GRIPRIAEEE RRKKEEDEKK  300
AAEAALNQKK LKEKEKKLLR KERSRLRTLS GSVVSEDLLD LSDDKVEGLC MSLNIEQLRN  360
LCDKMERKEG LGRAELLREA LGSDNKSKDE KQHNEKKNQQ LNGSVGVNKQ VIFGSNEKRE  420
SPWGKEEIEM LRKGVQKYPK GTSRRWEVIS EYIGTGRSVE EILKATKTVL LQKPDSAKAF  480
DSFLEKRKPA QSIASPLTAR EDLPGNLNGN PSSSPIENGQ KRDESNTGNG VSSSSDQDIW  540
SDLQEKALVQ SLKTFPKETN QRWERVAAAV PGKTVNQCKK KFAMLKENFR NKKNAVFEEF  600
SEGNLPARGL FSMELVFRTA YSTFHSLVSL LGNSNQIQNS NVLEKNSCQS DGSDPSSSPI  660
ENGQKRDESN TGNGVSSSSD QDIWSDLQEK ALVQSLKTFP KETNQRWERV AAAVPGKTVN  720
QCKKKFAMLK ENFRNKKNAV FEEFSEGNLP ARGLFSMELV FRTAYSTFHS LVSLLGNSNQ  780
IQLYYFCSYI ISTY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1291312RRKKEEDEKKAAEAALNQKKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11450.11e-112MYB family protein