PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu004107.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 719aa MW: 80094.6 Da PI: 7.2999

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu004107.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.7e-05	77	98	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 kC++C++ F + n++rHir+H Oeu004107.1 77 KCEKCSREFFSLINYRRHIRVH 98 7*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MPLAKLNTTG TLNAIKSEGN DSLDTFIGQT ATAKEPFLSF SRPGESPVQW IQLLHALDQP 60 DLPGWPLLTP LKVQMQKCEK CSREFFSLIN YRRHIRVHRR SLNVDKESHK NRDLLAAFWD 120 KLTLEQAKEI VSLNDVSIKV CLSIEYCSSR SDGLRFGPET SNGESLSSSN IAELPGSSVV 180 RALATSLRKP GIWTLPQAYV KAGSKLLDII QAKPSRLPIS SEELFAILDD ASERTFLCAG 240 TAESVQKYIF EGEAAKNGLE LRNLVACTSF LFEYQLVKAW VADKDAEALR CQKLLVAEEE 300 AAQKRQAELL KRKKLKKLRQ KEQRAREQLN EHKAEMNINI DVLAQPRSAE ASDPLSPSDF 360 SPNSPNLLTN IAFCPEPIKF SSKEIGEDIE AQIDCSSEYI DQDNSLTIEP QVIVANGHQH 420 LLTNSWQMPN SQRCGQNGIH VCQNLQASKP EPMQKHGPSR DRGTLLDGSK IWTKKCKADI 480 EGESWRRRVL RESSNQTQEN SREVMIGSIS VLLRNSITQK QDAYPDKASD DMLKNGISEK 540 PIKSDAVPFG MNRVSRHETR GPLPVQRGNI DFEDELLLEK VCDRTVSSEK CVQSCSMEDK 600 DHGNSGRRSH VLSDAQTGAS FFSSIDAKEF LAQRWKEAIS AEHVRLVLTS EHESPSRPDV 660 QDDDSMMSLG SDANELGVLG NAENWPFSST SGKVQVKFRP KPGKSLKVKY IPKQKAAA*

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MPLAKLNTTG TLNAIKSEGN DSLDTFIGQT ATAKEPFLSF SRPGESPVQW IQLLHALDQP  60
DLPGWPLLTP LKVQMQKCEK CSREFFSLIN YRRHIRVHRR SLNVDKESHK NRDLLAAFWD  120
KLTLEQAKEI VSLNDVSIKV CLSIEYCSSR SDGLRFGPET SNGESLSSSN IAELPGSSVV  180
RALATSLRKP GIWTLPQAYV KAGSKLLDII QAKPSRLPIS SEELFAILDD ASERTFLCAG  240
TAESVQKYIF EGEAAKNGLE LRNLVACTSF LFEYQLVKAW VADKDAEALR CQKLLVAEEE  300
AAQKRQAELL KRKKLKKLRQ KEQRAREQLN EHKAEMNINI DVLAQPRSAE ASDPLSPSDF  360
SPNSPNLLTN IAFCPEPIKF SSKEIGEDIE AQIDCSSEYI DQDNSLTIEP QVIVANGHQH  420
LLTNSWQMPN SQRCGQNGIH VCQNLQASKP EPMQKHGPSR DRGTLLDGSK IWTKKCKADI  480
EGESWRRRVL RESSNQTQEN SREVMIGSIS VLLRNSITQK QDAYPDKASD DMLKNGISEK  540
PIKSDAVPFG MNRVSRHETR GPLPVQRGNI DFEDELLLEK VCDRTVSSEK CVQSCSMEDK  600
DHGNSGRRSH VLSDAQTGAS FFSSIDAKEF LAQRWKEAIS AEHVRLVLTS EHESPSRPDV  660
QDDDSMMSLG SDANELGVLG NAENWPFSST SGKVQVKFRP KPGKSLKVKY IPKQKAAA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	309	317	LLKRKKLKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25610.1	1e-106	C2H2 family protein