PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu002100.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Nin-like
Protein Properties Length: 314aa    MW: 36077.9 Da    PI: 5.1925
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu002100.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK82.93.2e-26140189352
       RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  k +s e +skyF++pi++AA+eL+v+lT+LK++CR++GI+RWPhRk++sl
  Oeu002100.1 140 KILSKEAISKYFYMPITKAARELNVGLTLLKKRCRELGIRRWPHRKLTSL 189
                  66899******************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MRTESMTGWS SNEVMDREEY QDAFSFPTQL SSDFSSFLAN LEFQHDQLPI QETAFDAVPS  60
MEMFLHNDPL YSSLNLEPDQ ILIPENFFCD YGSAMGRFET GNQQLLLENT NKDITVEEPV  120
QDMKRVKRHR EVKTHTSNCK ILSKEAISKY FYMPITKAAR ELNVGLTLLK KRCRELGIRR  180
WPHRKLTSLQ TLIKNVQELR QEEGEGKLRD AIQILEQERK LMEEVPDLQL EDKTKRLRQA  240
CFKVNYKKRK LMAGMPSMIS KSKSAGSSGD NPAASVEMNA LDCGGSRVED EYDDDEIKSL  300
LCYYFSSSSD TIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-52Nin-like family protein