PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu000049.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB | ||||||||
Protein Properties | Length: 325aa MW: 36473.1 Da PI: 5.8487 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 18 | 63 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v+++G+++W++I ++ + Rt+k+c++rw + Oeu000049.2 18 KGPWKAEEDEVLINHVNKYGPRDWSSIRSKGLLQRTGKSCRLRWVN 63 79*************************8887799**********87 PP | |||||||
2 | Myb_DNA-binding | 43 | 1.1e-13 | 74 | 113 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++eE+ +d+ q+G++ W++Ia +++ gRt++++k++w Oeu000049.2 74 KFSAEEERTVIDLQGQFGNK-WAKIATYLP-GRTDNDVKNFW 113 79******************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MNGRGRMLCD DTGMIIKKGP WKAEEDEVLI NHVNKYGPRD WSSIRSKGLL QRTGKSCRLR 60 WVNKLRPNLK NGVKFSAEEE RTVIDLQGQF GNKWAKIATY LPGRTDNDVK NFWSSRQKRL 120 ARILQTSAPS CNKSRKNKEI QVPLLDGVPY LEAPKFSLST EEESIIKSQS SSSSYIDYSE 180 TIKMVPLQGL VYSGSLNFEQ SPFQLEFTPA IDKKSYEEQQ LQLCFPQIPQ LQSDYSLSLE 240 SQDFITRLGD PNFYDVFGQG SGTELGNGPF PILPSCFGPD GGSQTTGQGE NHNAVTPDSF 300 IDDFPPMDMF NHLDPLPSPS QWLV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 5e-78 | MYB family protein |