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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIT40510 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 203aa MW: 22413.4 Da PI: 4.7731 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 14.6 | 9.2e-05 | 33 | 55 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C+ C + F++ L H+++H
OIT40510 33 YTCTFCRREFRSAQALGGHMNVH 55
9********************99 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 203 aa Download sequence |
MWNPKDDDDS WEIRAFEEDT SNSMGATWPP RSYTCTFCRR EFRSAQALGG HMNVHRRDRA 60 KLNQTPLASN SSTTFPNANS TLLIQSQEFI TNGGLCLLYS LPNNPNTIFN PSTVKSSVDP 120 STLLTIPPSF MNNLMSSCTP PSLNFPINQP QNINSSSNTS ETSASNGTSN DNNHNDGSSK 180 RDSAIEDEID LELRLGWRSS SSN |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G17810.1 | 3e-33 | C2H2 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIT40510 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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