PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT39390
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 342aa    MW: 38130.9 Da    PI: 7.7041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT39390genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.52.5e-21139188255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa+a+++a++k++g
  OIT39390 139 RYRGVRQRP-WGKWAAEIRDPY----KaARVWLGTFDTAEDAARAYDEAALKFRG 188
               7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MCMLKVANFR NKANYKPIRD DEAGNINVMF SGINREEEMS VMVSALTRVV RGEDKVLNQG  60
DGGDVAANNW NSNIGAGVGE KREREDQSEQ LFLSDIRSSG GESSNIRTIA SNTPTTESTF  120
IYLTPTYEEG NINHQPRRRY RGVRQRPWGK WAAEIRDPYK AARVWLGTFD TAEDAARAYD  180
EAALKFRGSK AKLNFPENVK LMPTSSTHEQ SPLKLFPHQN AVSNLGFPTS TFPTDYVENT  240
RVSSFSSNYP IIHTQPNSNN TNINPQIFLN DDFQWLQPPS SLLNQFQYSS SSSSSLSSSS  300
SQLPFLPRMS FQGSKPTSQS SGSDFRATSS DSTYDHPSSS SR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.12e-29ERF family protein