PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT38626

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 429aa MW: 47475.5 Da PI: 7.2649

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT38626	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.9	4.1e-32	254	307	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ OIT38626 254 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 307 9****************************************************7 PP
2	Myb_DNA-binding	46.6	8.1e-15	255	306	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ OIT38626 255 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 306 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MPLEGVFIEP QSTNSKPIPD LSLNISPPNS SSSPSCNNIN ELLATPSFDL SSRCTTEVSE 60 NHRRLEFSES GNCLTELSLA HPTTTTTTTT TTSATIYDES RRGFLDLPRN PYYNNHYSQN 120 YNHMVQPMNQ INHGVSSLDV SDGLRPIKGI PVYNHNRSFP FLANLDKEKD PKMCFYPMAS 180 SSSPLFSPTS SSPYINTRFN GISSSYQVPH HHLHHSQYGV GLGHSSHETA TSHHSLMRSR 240 FLPKLPAKRS MRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS 300 HLQMYRTVKT TDKPAASSGQ SDGSGEDDLT TIGSTGAGDR TGLCRFTDQR GASDGSVQPE 360 SDYPSTANPI LWSNSSSSRE GWLQANSNDA NGLRSPCFPS HQRSGHQIEK NPSLEFTLGR 420 PDWVEKEHD

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MPLEGVFIEP QSTNSKPIPD LSLNISPPNS SSSPSCNNIN ELLATPSFDL SSRCTTEVSE  60
NHRRLEFSES GNCLTELSLA HPTTTTTTTT TTSATIYDES RRGFLDLPRN PYYNNHYSQN  120
YNHMVQPMNQ INHGVSSLDV SDGLRPIKGI PVYNHNRSFP FLANLDKEKD PKMCFYPMAS  180
SSSPLFSPTS SSPYINTRFN GISSSYQVPH HHLHHSQYGV GLGHSSHETA TSHHSLMRSR  240
FLPKLPAKRS MRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS  300
HLQMYRTVKT TDKPAASSGQ SDGSGEDDLT TIGSTGAGDR TGLCRFTDQR GASDGSVQPE  360
SDYPSTANPI LWSNSSSSRE GWLQANSNDA NGLRSPCFPS HQRSGHQIEK NPSLEFTLGR  420
PDWVEKEHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-62	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT38626