PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT36547

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 591aa MW: 64315.6 Da PI: 7.9529

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT36547	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.1	2.7e-31	248	305	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK vkgsefprsYY+Ct+++C+vkk ers +++++ei+Y+g+H+h+k OIT36547 248 DDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSP-EGQITEIVYKGSHDHPK 305 8**************************************.*************85 PP
2	WRKY	106.2	1.7e-33	412	470	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+ OIT36547 412 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGRHNHD 470 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MEDSHSKSHS HSHSQQQHSS SEQLRDGISA VNDGGISSGA AGFNGGAKYK FMTPAKLPIS 60 RSTCITIPPG LSPSSFLESP VLLSNIKAEP SPTTGSFSKL QAVQGSGGNA AFLLKRGYSS 120 GNTYSEGKSS CFEFKFAGGS SSTSGFVAEH VISTGLNQQQ NEPLKEVQDQ SHPQLVATSS 180 LAKHKMASSK ELSLSAPINV DDFSKEESLS APINVDAMNM RGQSNTSMQV SLADHKDVSS 240 VTAERSSDDG YNWRKYGQKL VKGSEFPRSY YKCTYPNCEV KKIFERSPEG QITEIVYKGS 300 HDHPKPQLSR RFTPGALMSI QEDKFFVEDK FNTNAQTGKI EPISTPVSPQ QVDADGPEGA 360 VSQMQGTSDD MDEDDPFVKR RKMDGAMDIT PVIKPIREPR VVVQTVSEVD ILDDGYRWRK 420 YGQKVVRGNP NPRSYYKCTN AGCPVRKHVE RASHDPKAVI TTYEGRHNHD VPAARSNNHE 480 MAGSTPVTGG SRIRAEETYS INLDLGVGIG YGVENGNNRQ LHTVHNQVQV SRSGMMVVQP 540 AAIAARYGIV NGSMSRFGPI DNHVQGHGFE TLPLQPSTQF PQNYGKILLG P

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MEDSHSKSHS HSHSQQQHSS SEQLRDGISA VNDGGISSGA AGFNGGAKYK FMTPAKLPIS  60
RSTCITIPPG LSPSSFLESP VLLSNIKAEP SPTTGSFSKL QAVQGSGGNA AFLLKRGYSS  120
GNTYSEGKSS CFEFKFAGGS SSTSGFVAEH VISTGLNQQQ NEPLKEVQDQ SHPQLVATSS  180
LAKHKMASSK ELSLSAPINV DDFSKEESLS APINVDAMNM RGQSNTSMQV SLADHKDVSS  240
VTAERSSDDG YNWRKYGQKL VKGSEFPRSY YKCTYPNCEV KKIFERSPEG QITEIVYKGS  300
HDHPKPQLSR RFTPGALMSI QEDKFFVEDK FNTNAQTGKI EPISTPVSPQ QVDADGPEGA  360
VSQMQGTSDD MDEDDPFVKR RKMDGAMDIT PVIKPIREPR VVVQTVSEVD ILDDGYRWRK  420
YGQKVVRGNP NPRSYYKCTN AGCPVRKHVE RASHDPKAVI TTYEGRHNHD VPAARSNNHE  480
MAGSTPVTGG SRIRAEETYS INLDLGVGIG YGVENGNNRQ LHTVHNQVQV SRSGMMVVQP  540
AAIAARYGIV NGSMSRFGPI DNHVQGHGFE TLPLQPSTQF PQNYGKILLG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.2	1e-154	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT36547