PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36389
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 323aa    MW: 37268.7 Da    PI: 5.2896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36389genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM78.31.8e-24121383128
       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               +G rFhPtd e++ ++Lk+ ++g++l+ e +++++diy    Pw++  +  ++eek  yfF++ +k++++ +r +r+ ++g+Wka+    ++++ kg++vg
  OIT36389  12 MGERFHPTDGEMI-NFLKRFLKGETLPSEYAFQHADIYGDrPPWEIFgADSNSEEKVRYFFTRLKKQKSEHTRVRRTCANGTWKAQTGIVPIKNGKGTVVG 111
               699**********.9*************889*******87478***755666677788***************************9999*****9****** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                ++ + f+  ++++ ++  W+m+ey +
  OIT36389 112 FRRNFKFHCSSKEREHNKIWLMKEYYV 138
               ********99999999*********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MSTVPIARRR IMGERFHPTD GEMINFLKRF LKGETLPSEY AFQHADIYGD RPPWEIFGAD  60
SNSEEKVRYF FTRLKKQKSE HTRVRRTCAN GTWKAQTGIV PIKNGKGTVV GFRRNFKFHC  120
SSKEREHNKI WLMKEYYVGD DFFRGNNIPK EDIVVCRIKK NIREKKVKDD AVSMDEQELA  180
QIIEAMFHEL DEYNSPTQSA TVCQGNETHN EFIDNTMLHA KYAPDDYLSG LNYQNSQLLI  240
NSDEGNEVTI LGNQNNMMAM LTEDAITNLT TSEQEAYDQL LTAEIEQGHG ADHQTNNSEF  300
WEAMNGILKG VNIDVPDDWL HDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-15NAC family protein