PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT36191
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family BBR-BPC
Protein Properties Length: 302aa    MW: 33620.8 Da    PI: 8.2137
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT36191genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind309.41.2e-941130227301
  GAGA_bind  27 qlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllvensla....salpvgvqvlsgtksidslqqlsepqleds 122
                  m+++aerda+irern+al e+k a+aerdma lqrd+alaern+a+ erd++++al l e s++      +++g ++ sg+k+i + qq  ++ + + 
   OIT36191  11 TYMAIMAERDAAIRERNMALEERKRAFAERDMAMLQRDAALAERNAAIQERDDAIAALRLGESSINdnnvVPDSPGNDTESGAKHIYNQQQ-MHKTIVEA 109
                569********************************************************99998887643444566777778888876666.45555555 PP

  GAGA_bind 123 avelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesader..................skaekksidlvlngvslD 204
                a +  e  +        + ++++e k++kk +r+k+ +++k+ k  ++ +   ++ +++  +++                  ++ +  + +l+ln++++D
   OIT36191 110 AHGSMEDPT----AGYLKGTDTSEGKNPKKVRRPKESRHNKQAKIPRQAKIGAESLNMQVISTSsddwvnlqeldsdkeggdMQLTSWKDNLGLNQINFD 205
                555222222....222223344444455555555555555555555555555555555555422355677889999999999555545569********* PP

  GAGA_bind 205 estlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                es++PvPvCsCtG+++ CYkWG GGWqSaCCtttiS+yPLP+ +++r +R++grKmS+gaf+klL++La++Gydls p+DLkdhWAkHGtn++ t++
   OIT36191 206 ESAMPVPVCSCTGTPQPCYKWGHGGWQSACCTTTISMYPLPQISNKRYSRVGGRKMSGGAFSKLLNRLAGQGYDLSVPLDLKDHWAKHGTNRYSTLK 302
                *********************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MMDHNNFTIK TYMAIMAERD AAIRERNMAL EERKRAFAER DMAMLQRDAA LAERNAAIQE  60
RDDAIAALRL GESSINDNNV VPDSPGNDTE SGAKHIYNQQ QMHKTIVEAA HGSMEDPTAG  120
YLKGTDTSEG KNPKKVRRPK ESRHNKQAKI PRQAKIGAES LNMQVISTSS DDWVNLQELD  180
SDKEGGDMQL TSWKDNLGLN QINFDESAMP VPVCSCTGTP QPCYKWGHGG WQSACCTTTI  240
SMYPLPQISN KRYSRVGGRK MSGGAFSKLL NRLAGQGYDL SVPLDLKDHW AKHGTNRYST  300
LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.22e-83BBR-BPC family protein