PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT34895

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

MYB_related

Protein Properties

Length: 735aa MW: 81463 Da PI: 9.555

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT34895	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	36.5	1.2e-11	17	70	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48 rW t+E++ll++av+++G+++W+++a +++ +++ +c++++++++ OIT34895 17 SRWGTWEELLLACAVNRYGTKSWDSVAVELQkrstapaRLLSPHNCRLKYLDLK 70 69**********************************889*******9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MAKPDATVEN SSEEEESRWG TWEELLLACA VNRYGTKSWD SVAVELQKRS TAPARLLSPH 60 NCRLKYLDLK RRYSNECNGN GNVNDDDEDK EKTVCVPLLE ELRKLRVAEL RREVERYDLS 120 IVSLQLKKQR LEEERERSMQ QTENGDSKSD LAKNERRGAN NENFEETEIG IKPEDKSSPE 180 LVVTEEVSEE ASDKDQQSVS ESSSTDLKHS CSLKSSAEEN EDKTKPVRTV TVKTEPLQTG 240 SIKEEPDKCA EERPVREDSC NGSSDSVEKP PVGVTMKVEP VSESPELVES MAESKGGEEV 300 TKENSDVQSS VSKSRKKVDD IVVGGCSSGD EREKENRSPA VKEIPVESQP LIAFLEKIRS 360 HKLGSMFERR LESQEAENYS NLVRQHIDLE MVQSWLENGR YLSCKSKFFR DLLLLVSNAI 420 VFFKKNSSEF VAATELRQLI LKEISQTKAK SYSLSGKQTS LKSASLSQKE ITKPSDSLLL 480 KTNISGSMIV CRKRSSIKAK ASASSSGGDK KREQSITRPV EKVVVDTLQQ PSQLASNAGE 540 NRITKKRTRD RFASGSASLN KNDKGRPNTA SIKNLAAVVD KNQGEGESSS QHPQSKSESR 600 NEQSNTDVKK RSVATFLNRM KQSSSSNSGL LLDALKSRPL SSASKGGSEH KKNESGTGGG 660 RKEPASLKTH QKKEPTFSKN PEAKQAKEKG SPMKKNIGRP PKRGADPSPP SSKRSREGAE 720 SAAIPTKQPK KRSRR

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MAKPDATVEN SSEEEESRWG TWEELLLACA VNRYGTKSWD SVAVELQKRS TAPARLLSPH  60
NCRLKYLDLK RRYSNECNGN GNVNDDDEDK EKTVCVPLLE ELRKLRVAEL RREVERYDLS  120
IVSLQLKKQR LEEERERSMQ QTENGDSKSD LAKNERRGAN NENFEETEIG IKPEDKSSPE  180
LVVTEEVSEE ASDKDQQSVS ESSSTDLKHS CSLKSSAEEN EDKTKPVRTV TVKTEPLQTG  240
SIKEEPDKCA EERPVREDSC NGSSDSVEKP PVGVTMKVEP VSESPELVES MAESKGGEEV  300
TKENSDVQSS VSKSRKKVDD IVVGGCSSGD EREKENRSPA VKEIPVESQP LIAFLEKIRS  360
HKLGSMFERR LESQEAENYS NLVRQHIDLE MVQSWLENGR YLSCKSKFFR DLLLLVSNAI  420
VFFKKNSSEF VAATELRQLI LKEISQTKAK SYSLSGKQTS LKSASLSQKE ITKPSDSLLL  480
KTNISGSMIV CRKRSSIKAK ASASSSGGDK KREQSITRPV EKVVVDTLQQ PSQLASNAGE  540
NRITKKRTRD RFASGSASLN KNDKGRPNTA SIKNLAAVVD KNQGEGESSS QHPQSKSESR  600
NEQSNTDVKK RSVATFLNRM KQSSSSNSGL LLDALKSRPL SSASKGGSEH KKNESGTGGG  660
RKEPASLKTH QKKEPTFSKN PEAKQAKEKG SPMKKNIGRP PKRGADPSPP SSKRSREGAE  720
SAAIPTKQPK KRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	7e-55	MYB_related family protein

Link Out ? help Back to Top
Ensembl	OIT34895