PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33968

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

WRKY

Protein Properties

Length: 536aa MW: 59058.9 Da PI: 7.1187

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33968	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.3	4.4e-30	244	303	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+ ed +++++tYeg+Hnh+ OIT33968 244 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCIEDMSILITTYEGTHNHP 303 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MEAAFRKSIN GGLIKEEKRN KLADQSSSDE EGFIEDSNVL KVGKESEVRE DDNSKSQQKD 60 IGSDKEDDQL QSVKANMKEV MKENLRLKMH LDRIMKDYRN LQLQFHNIVQ RDAEKSNISI 120 INTRHAECNE AEFVSLSLGR TSSDTKKEEL SKILSKEKAE EEDNKGGLTL GLDCKFDLSV 180 KTTPTEFSTA NLSEENSSEE VKDEKGETWP PHKILKTMRN GEDELNPSKR AKVSVRVRCD 240 APTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCIEDMS ILITTYEGTH 300 NHPLSLSATS MAFTTSAAAS MLLSGSSSTS ESGPNPPATD TTNINGLNFY LSDSSKPKPF 360 YLQNSSISSS SSPPTITLDL TSSSSTSLLP QYNNRSMSSN YLPRYNSSTN ILNFSSLESN 420 PLLPMSWSNG ANNKNQEISS LSFAKRPQEN IFQSYLQNNT SAKPTQTLLS QDTIAAATKA 480 ITSDPNFQSA LAVALTSIIG SGGRNHAGGI EEKSGQNLKV TEPFPVLCSF PSTSKK

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MEAAFRKSIN GGLIKEEKRN KLADQSSSDE EGFIEDSNVL KVGKESEVRE DDNSKSQQKD  60
IGSDKEDDQL QSVKANMKEV MKENLRLKMH LDRIMKDYRN LQLQFHNIVQ RDAEKSNISI  120
INTRHAECNE AEFVSLSLGR TSSDTKKEEL SKILSKEKAE EEDNKGGLTL GLDCKFDLSV  180
KTTPTEFSTA NLSEENSSEE VKDEKGETWP PHKILKTMRN GEDELNPSKR AKVSVRVRCD  240
APTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCIEDMS ILITTYEGTH  300
NHPLSLSATS MAFTTSAAAS MLLSGSSSTS ESGPNPPATD TTNINGLNFY LSDSSKPKPF  360
YLQNSSISSS SSPPTITLDL TSSSSTSLLP QYNNRSMSSN YLPRYNSSTN ILNFSSLESN  420
PLLPMSWSNG ANNKNQEISS LSFAKRPQEN IFQSYLQNNT SAKPTQTLLS QDTIAAATKA  480
ITSDPNFQSA LAVALTSIIG SGGRNHAGGI EEKSGQNLKV TEPFPVLCSF PSTSKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18860.1	4e-56	WRKY family protein

Link Out ? help Back to Top
Ensembl	OIT33968