PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33867

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

G2-like

Protein Properties

Length: 335aa MW: 38532.8 Da PI: 6.9087

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33867	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.8	4.4e-32	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F++a+e+LGG++kAtPk +l++m+v gLt++hvkSHLQ+YR+ OIT33867 19 PRLRWTPDLHHCFLHAIEKLGGQDKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	47.4	4.3e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +++a+++lGg t+k++ ++m g+t ++ks++q+y+ OIT33867 20 RLRWTPDLHHCFLHAIEKLGGQdkaTPKLVLQMMDvRGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MGNCGRNGGV RQYIRSKVPR LRWTPDLHHC FLHAIEKLGG QDKATPKLVL QMMDVRGLTI 60 SHVKSHLQMY RSMKSEVNRQ DRSSTQQRKQ SLENHDCHQE EEGCIEQQKL LVYDPSFSPI 120 ERSDSPYFNS VQPTKRARIK TTNCSQRIRE AVANQYSKDD YIHSMADKSV VKERKKEGEN 180 GFIWQQTCGE SETERERETA HPALCNSTYF SLPQDFFQSF NPQVQESEIF KAAKQQDSKR 240 ESSKKCKFEG SRKIENVGEE EEEEKEDDDC RLSLALSLHH PSIQRSNTSS TISEISEAIS 300 SYSGSNLNHH EYHWLSSSEK HSVINLDLSI ALCSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	6e-34	G2-like family protein

Link Out ? help Back to Top
Ensembl	OIT33867