PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT33698
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 332aa    MW: 37237.5 Da    PI: 7.0734
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT33698genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.84.9e-17109158255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+WvAeIr p++   r+r +lg+f++aeeAa a++  + +++g
  OIT33698 109 RYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFDSAEEAAFAYDVEAFRFRG 158
               8*******9.**********954...5********************9999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MEYVESIGNI QATMLIDRPL KKLKIPSSEH KDLRAATNCD PKQSSYTAHN SRFSFPFALD  60
DQLPTQSPVQ NQTMISFAPQ NCFLDPCHLA LVQCRSTYNY GTVSTTPKRY RGVRQRHWGK  120
WVAEIRLPRK RTRLWLGTFD SAEEAAFAYD VEAFRFRGSD ARLNFPHLFL NDPSVNNIDE  180
TDSAAASSTS LSNNSYQVQH KNKRYIKQCQ KEDGITSAVG QSTSVLDRNI LQVNSDYQAS  240
TDAMQLKEAL FDSISDKRWL DILQSGSSIG SPFGNNISTD DNLQLQQCDF TIDPGFADDL  300
LSASAPLLTN CNRKIQLFSQ TPGIGDNSQG RL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G36060.12e-32ERF family protein