PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT33411

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

DBB

Protein Properties

Length: 299aa MW: 33094.1 Da PI: 7.4152

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT33411	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.3	1.3e-07	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ ++++e++ fC+ ++ lCe C H+ OIT33411 4 QCDVCNKNEASVFCTADEAALCEACDHRVHH 34 7*************************99973 PP
2	zf-B_box	28.9	2.4e-09	56	92	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 + C+ ++e +++lfC++++ lC++C l +Hk Ht OIT33411 56 PLCDICQERRAILFCQQDRAILCRECDLPIHKAneHT 92 78*****************************878865 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MKIQCDVCNK NEASVFCTAD EAALCEACDH RVHHVNKLAS KHERFSLLQP STKQFPLCDI 60 CQERRAILFC QQDRAILCRE CDLPIHKANE HTQKHNRYLF TGIKLSANSA LYSSTPSPSA 120 ASSANSSASS FKSQNPTNKP AAVETVTVVK EKVGGCNSQL VNVGGNNLTS SISEYLEMLP 180 GWHVEDFLDC STPNGSSKIG DEDMLSFWDT DLESHMSSFP PQNIGVWVPQ APPPLQSKQQ 240 TQTQFLSPSN LNFGGQIGIK DSREVNSIKS SRKWRDDNSF AVPQISPPST SFKRSRTLW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	9e-79	DBB family protein

Link Out ? help Back to Top
Ensembl	OIT33411