PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT32776
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 290aa    MW: 32134.5 Da    PI: 6.2907
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT32776genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.16.7e-21161210255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                y+GVr+++ +g+W+AeIrdp+    + +r++lg+f taeeAa+a+++a+ +++g
  OIT32776 161 NYRGVRQRP-WGKWAAEIRDPR----KaARVWLGTFNTAEEAARAYDKAAIEFRG 210
               59*******.**********94....36************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MQRSNKRFRE DGTSYTDQNN QQFPHFPRLT GEEEYSVMVS ALKNVINGST PMENNNTQHF  60
NLFSPFQYST ATSTATTVTA YSSPSNSMST IEQGNVVSPI LGVPAEQEPC PFCRIKGCLG  120
CDIFGTTSSA AVTFAESKVV AGDDNKKKST TIAIAKKKKK NYRGVRQRPW GKWAAEIRDP  180
RKAARVWLGT FNTAEEAARA YDKAAIEFRG PRAKLNFSFA DYTETQEQQS ASSSSPQQLP  240
EPQLQQGNNA EFGSEIWDQL MGDNEIQDWL TMMNFNGDSS DSTSGNVHSV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146160KKKSTTIAIAKKKKK
2155161AKKKKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-26ERF family protein